#INFO: PE => number of discordant paired end reads supporting the SV
#INFO: SR => number of split reads supporting the SV
#INFO: 1000G => 1000 Genomes Project call set
#INFO: DGV => Database of Genomic Variants
#INFO: GAP => UCSC gap regions
#INFO: inHouse => In-house database of SVs called in germline genomes
#INFO: COSMIC => COSMIC v86
#INFO: Cancer_census =>  Cancer Census COSMIC v86
#INFO: KnownFusion => Known list of fusions from NYGC and/or COSMIC
#chr1	start1	end1	chr2	start2	end2	type	score	strand1	strand2	evidence	tools	tumor--normal	info	cnv_changepoint_1	cnv_changepoint_2	splazerS_tumor	splazerS_normal
chrX	31178825	31178826	chrX	31198093	31198094	DEL	NA	+	-	[Svaba_SR=29,Svaba_PE=31],[Manta_PE=27,Manta_SR=25],[Lumpy_PE=17,Lumpy_SR=17]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=DMD;DisruptR=DMD;ClosestL=;ClosestR=	31283007	31283007	23,31178825,31198083	0,0,0
chrX	31283085	31283086	chrX	32020632	32020633	DEL	NA	+	-	[Svaba_SR=16,Svaba_PE=23],[Manta_PE=22,Manta_SR=19],[Lumpy_PE=17,Lumpy_SR=11]	svaba,manta,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=DMD;DisruptR=DMD;ClosestL=;ClosestR=	31283008	32080447	0,0,0	0,0,0
chrX	32059737	32059738	chrX	32274979	32274980	DEL	NA	+	-	[Svaba_SR=14,Svaba_PE=17],[Manta_PE=16,Manta_SR=14]	svaba,manta	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=DMD;DisruptR=DMD;ClosestL=;ClosestR=	32080447	32183116	12,32059739,32274976	0,0,0
chrX	32080415	32080416	chrX	32183133	32183134	DEL	NA	+	-	[Svaba_SR=23,Svaba_PE=23],[Manta_PE=17,Manta_SR=15],[Lumpy_PE=11,Lumpy_SR=12]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=DMD;DisruptR=DMD;ClosestL=;ClosestR=	32080447	32183116	13,32080415,32183133	0,0,0
chrX	34041660	34041661	chrX	34044587	34044588	DEL	NA	+	-	[Svaba_SR=28,Svaba_PE=36],[Manta_PE=29,Manta_SR=27],[Lumpy_PE=24,Lumpy_SR=16]	lumpy,svaba,manta	COLO-829_80--COLO-829BL_40	known=;COSMIC;ClosestL=;ClosestR=	32183116	32183116	17,34041662,34044577	0,0,0
chr1	86871327	86871328	chr10	33097524	33097525	TRA	NA	+	+	[Svaba_SR=26,Svaba_PE=15],[Manta_PE=18,Manta_SR=0]	svaba,manta	COLO-829_80--COLO-829BL_40	known=;DisruptL=SELENOF;DisruptR=AL121748.1;ClosestL=;ClosestR=ITGB1-DT	86871338	33097569	0,0,0	0,0,0
chr1	207807887	207807888	chr1	207841472	207841473	DEL	NA	+	-	[Svaba_SR=27,Svaba_PE=26],[Manta_PE=18,Manta_SR=23],[Lumpy_PE=8,Lumpy_SR=19]	lumpy,svaba,manta	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=MIR29B2CHG;DisruptR=MIR29B2CHG;ClosestL=MIR29B2;ClosestR=	248574815	248574815	20,207807885,207841472	0,0,0
chr1	224458900	224458901	chr1	224612417	224612418	DUP	NA	-	+	[Svaba_SR=59,Svaba_PE=42],[Manta_PE=40,Manta_SR=47],[Lumpy_PE=39,Lumpy_SR=19]	svaba,lumpy,manta	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=CNIH3;DisruptR=AC096537.1,CNIH3;ClosestL=;ClosestR=	248574815	248574815	0,0,0	0,0,0
chr1	224595092	224595093	chr1	224598331	224598332	DEL	NA	+	-	[Svaba_SR=59,Svaba_PE=64],[Manta_PE=65,Manta_SR=49],[Lumpy_PE=57,Lumpy_SR=16]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=CNIH3;DisruptR=CNIH3;ClosestL=AC096537.1;ClosestR=AC096537.1	248574815	248574815	0,0,0	0,0,0
chr2	94282212	94282213	chr2	94289917	94289918	DEL	NA	+	-	[Manta_PE=4,Manta_SR=24]	manta	COLO-829_80--COLO-829BL_40	known=;ClosestL=;ClosestR=	10005	10005	19,94282214,94289918	0,0,0
chr3	24523614	24523615	chr3	24524687	24524688	INV	NA	-	-	[Svaba_SR=80,Svaba_PE=112],[Manta_PE=114,Manta_SR=80],[Lumpy_PE=82,Lumpy_SR=57]	lumpy,svaba,manta	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=THRB-AS1;DisruptR=THRB-AS1;ClosestL=MIR4792;ClosestR=MIR4792	24523548	24523548	54,24523616,24524687	0,0,0
chr3	25359110	25359111	chr12	72273111	72273112	TRA	NA	+	-	[Svaba_SR=56,Svaba_PE=32],[Manta_PE=29,Manta_SR=55],[Lumpy_PE=18,Lumpy_SR=27]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=RARB;DisruptR=TRHDE-AS1,TRHDE;Fusion=RARB-TRHDE;ClosestL=RNA5SP126;ClosestR=	25359526	133264924	15,25359121,72273109	0,0,0
chr3	25359219	25359220	chr10	58717811	58717812	TRA	NA	+	+	[Manta_PE=30,Manta_SR=0]	manta	COLO-829_80--COLO-829BL_40	known=;DisruptL=RARB;DisruptR=BICC1;ClosestL=RNA5SP126;ClosestR=FAM133CP	25359526	33097570	0,0,0	0,0,0
chr3	25359567	25359568	chr10	58717463	58717464	TRA	NA	+	-	[Svaba_SR=67,Svaba_PE=41],[Manta_PE=39,Manta_SR=59],[Lumpy_PE=37,Lumpy_SR=8]	svaba,manta,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=RARB;DisruptR=BICC1;Fusion=RARB-BICC1;ClosestL=RNA5SP126;ClosestR=FAM133CP	25359527	33097570	45,25359569,58717463	0,0,0
chr3	25359567	25359568	chr12	72273293	72273294	TRA	NA	+	+	[Svaba_SR=100,Svaba_PE=14],[Manta_PE=13,Manta_SR=0]	manta,svaba	COLO-829_80--COLO-829BL_40	known=;DisruptL=RARB;DisruptR=TRHDE-AS1,TRHDE;Fusion=RARB-TRHDE-AS1;ClosestL=RNA5SP126;ClosestR=	25359527	133264924	0,0,0	0,0,0
chr3	26390477	26390478	chr6	26193809	26193810	TRA	NA	-	-	[Svaba_SR=0,Svaba_PE=15],[Manta_PE=21,Manta_SR=22]	svaba,manta	COLO-829_80--COLO-829BL_40	known=;ClosestL=;ClosestR=HIST1H1PS1	26410780	89830	36,26390426,26193810	0,0,0
chr3	26622429	26622430	chr3	26623007	26623008	INV	NA	+	+	[Manta_PE=105,Manta_SR=79],[Lumpy_PE=100,Lumpy_SR=53]	lumpy,manta	COLO-829_80--COLO-829BL_40	known=;DisruptL=AC099754.1;DisruptR=LRRC3B;Fusion=LRRC3B+AC099754.1;ClosestL=LRRC3B;ClosestR=AC099754.1	26622389	26622389	52,26622431,26623008	0,0,0
chr3	60147025	60147026	chr3	60218814	60218815	DEL	NA	+	-	[Svaba_SR=21,Svaba_PE=25],[Manta_PE=23,Manta_SR=18],[Lumpy_PE=20,Lumpy_SR=8]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;Cancer_census=FHIT|Tier1;DisruptL=FHIT;DisruptR=FHIT;ClosestL=;ClosestR=	26622389	26622389	12,60147027,60218814	0,0,0
chr3	60886452	60886453	chr3	61027540	61027541	DEL	NA	+	-	[Svaba_SR=31,Svaba_PE=29],[Manta_PE=24,Manta_SR=27],[Lumpy_PE=14,Lumpy_SR=20]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=FHIT;DisruptR=FHIT;ClosestL=;ClosestR=	26622389	26622389	21,60886452,61027540	0,0,0
chr4	75174893	75174894	chr5	31849710	31849711	TRA	NA	+	-	[Manta_PE=6,Manta_SR=0]	manta	COLO-829_80--COLO-829BL_40	known=;DisruptL=;DisruptR=PDZD2;ClosestL=AC093870.1;ClosestR=RPL5P14	51108134	28962828	3,75174888,31849905	0,0,0
chr5	28787888	28787889	chr5	28962988	28962989	DEL	NA	+	-	[Svaba_SR=22,Svaba_PE=27],[Manta_PE=21,Manta_SR=17],[Lumpy_PE=13,Lumpy_SR=11]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=AC008825.1;DisruptR=;ClosestL=;ClosestR=	28787799	28962828	13,28787890,28962988	0,0,0
chr6	138452921	138452922	chr15	23472018	23472019	TRA	NA	-	-	[Svaba_SR=26,Svaba_PE=20],[Manta_PE=8,Manta_SR=27],[Lumpy_PE=3,Lumpy_SR=20]	svaba,manta,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=NHSL1;DisruptR=;ClosestL=AL391669.1;ClosestR=	170740360	23747520	0,0,0	0,0,0
chr6	138453044	138453045	chr15	23467471	23467472	TRA	NA	+	+	[Svaba_SR=31,Svaba_PE=22],[Manta_PE=15,Manta_SR=27],[Lumpy_PE=4,Lumpy_SR=23]	svaba,manta,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=NHSL1;DisruptR=;ClosestL=AL391669.1;ClosestR=	170740360	23747520	24,138453044,23467472	0,0,0
chr7	57403873	57403874	chr7	57436402	57436403	DEL	NA	+	-	[Svaba_SR=59,Svaba_PE=58],[Manta_PE=49,Manta_SR=41],[Lumpy_PE=30,Lumpy_SR=32]	lumpy,manta,svaba	COLO-829_80--COLO-829BL_40	known=;DisruptL=AC237221.2;DisruptR=;ClosestL=AC237221.1;ClosestR=SAPCD2P2	16339	16339	38,57403873,57436402	0,0,0
chr7	78352521	78352522	chr7	78452931	78452932	DEL	NA	+	-	[Svaba_SR=29,Svaba_PE=21],[Manta_PE=21,Manta_SR=22],[Lumpy_PE=13,Lumpy_SR=17]	lumpy,manta,svaba	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=RPL13AP17,MAGI2;DisruptR=MAGI2;ClosestL=;ClosestR=	126106499	126106499	21,78352523,78452930	0,0,0
chr7	78560889	78560890	chr7	78628368	78628369	DEL	NA	+	-	[Svaba_SR=18,Svaba_PE=22],[Manta_PE=21,Manta_SR=15],[Lumpy_PE=17,Lumpy_SR=9]	lumpy,manta,svaba	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=MAGI2;DisruptR=MAGI2;ClosestL=;ClosestR=	126106499	126106499	12,78560889,78628368	0,0,0
chr7	86215351	86215352	chr7	86224383	86224384	DUP	NA	-	+	[Svaba_SR=26,Svaba_PE=19],[Manta_PE=23,Manta_SR=23],[Lumpy_PE=20,Lumpy_SR=20]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=;DisruptR=;ClosestL=SOCS5P1;ClosestR=SOCS5P1	126106499	126106499	20,86215351,86224388	0,0,0
chr7	104844619	104844620	chr7	104971854	104971855	DUP	NA	-	+	[Svaba_SR=65,Svaba_PE=69],[Manta_PE=57,Manta_SR=53],[Lumpy_PE=44,Lumpy_SR=44]	lumpy,svaba,manta	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=LHFPL3;DisruptR=LINC01004;ClosestL=AC091286.1;ClosestR=AC007384.1	126106499	126106499	42,104844620,104971855	0,0,0
chr7	110753275	110753276	chr7	110754404	110754405	DEL	NA	+	-	[Svaba_SR=29,Svaba_PE=35],[Manta_PE=26,Manta_SR=18],[Lumpy_PE=23,Lumpy_SR=12]	svaba,lumpy,manta	COLO-829_80--COLO-829BL_40	known=;DisruptL=IMMP2L;DisruptR=IMMP2L;ClosestL=;ClosestR=	126106499	126106499	16,110753277,110754404	0,0,0
chr7	126106068	126106069	chr7	126526846	126526847	DEL	NA	+	-	[Svaba_SR=51,Svaba_PE=54],[Manta_PE=42,Manta_SR=42],[Lumpy_PE=29,Lumpy_SR=33]	manta,lumpy,svaba	COLO-829_80--COLO-829BL_40	known=;DisruptL=;DisruptR=GRM8;ClosestL=;ClosestR=AC000374.1	126106499	126458400	35,126106069,126526844	0,0,0
chr7	126458433	126458434	chr7	126527386	126527387	INV	NA	-	-	[Svaba_SR=46,Svaba_PE=42],[Manta_PE=41,Manta_SR=37],[Lumpy_PE=33,Lumpy_SR=24]	manta,lumpy,svaba	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=GRM8;DisruptR=GRM8;ClosestL=;ClosestR=AC000374.1	126458400	126458400	34,126458435,126527386	0,0,0
chr7	151049569	151049570	chr15	84141972	84141973	TRA	NA	+	-	[Svaba_SR=47,Svaba_PE=55],[Manta_PE=51,Manta_SR=35],[Lumpy_PE=37,Lumpy_SR=19]	lumpy,manta,svaba	COLO-829_80--COLO-829BL_40	known=;DisruptL=ASIC3;DisruptR=;ClosestL=ABCB8;ClosestR=EFL1P1	151049493	84142010	28,151049571,84141972	0,0,0
chr8	130235868	130235869	chr8	130262400	130262401	DUP	NA	-	+	[Svaba_SR=17,Svaba_PE=24],[Manta_PE=20,Manta_SR=18],[Lumpy_PE=18,Lumpy_SR=5]	lumpy,svaba,manta	COLO-829_80--COLO-829BL_40	known=;DisruptL=ASAP1;DisruptR=ASAP1;ClosestL=;ClosestR=	145078494	145078494	16,130235869,130262401	0,0,0
chr9	28031836	28031837	chr9	28059141	28059142	INV	NA	+	+	[Svaba_SR=28,Svaba_PE=25],[Manta_PE=20,Manta_SR=26],[Lumpy_PE=15,Lumpy_SR=8]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=LINGO2;DisruptR=LINGO2;ClosestL=;ClosestR=	30338983	30338983	25,28031837,28059149	0,0,0
chr9	28031864	28031865	chr9	28034468	28034469	INV	NA	-	-	[Svaba_SR=18,Svaba_PE=22],[Manta_PE=24,Manta_SR=19],[Lumpy_PE=18,Lumpy_SR=11]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=LINGO2;DisruptR=LINGO2;ClosestL=;ClosestR=	30338983	30338983	9,28031863,28034457	0,0,0
chr9	28034287	28034288	chr9	28157693	28157694	DEL	NA	+	-	[Svaba_SR=19,Svaba_PE=25],[Manta_PE=27,Manta_SR=19],[Lumpy_PE=19,Lumpy_SR=5]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=LINGO2;DisruptR=LINGO2;ClosestL=;ClosestR=AL451124.1	30338983	30338983	18,28034301,28157693	0,0,0
chr9	95355079	95355080	chr9	108129717	108129718	INV	NA	+	+	[Manta_PE=2,Manta_SR=2],[Lumpy_PE=5,Lumpy_SR=2]	lumpy,manta	COLO-829_80--COLO-829BL_40	known=;Cancer_census=KLF4|Tier1,PTCH1|Tier1,XPA|Tier1,NR4A3|Tier1;DisruptL=FANCC;DisruptR=;ClosestL=;ClosestR=	138313848	138313848	2,95355081,108129718	0,0,0
chr9	95355080	95355081	chr9	108129715	108129716	INV	NA	-	-	[Manta_PE=3,Manta_SR=1],[Lumpy_PE=5,Lumpy_SR=2]	lumpy,manta	COLO-829_80--COLO-829BL_40	known=;Cancer_census=KLF4|Tier1,PTCH1|Tier1,XPA|Tier1,NR4A3|Tier1;DisruptL=FANCC;DisruptR=;ClosestL=;ClosestR=	138313848	138313848	0,0,0	0,0,0
chr10	7017548	7017549	chr19	17286001	17286002	TRA	NA	-	+	[Svaba_SR=18,Svaba_PE=22],[Manta_PE=20,Manta_SR=15],[Lumpy_PE=15,Lumpy_SR=11]	svaba,manta,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=;DisruptR=ANKLE1;ClosestL=;ClosestR=AC010463.1	7591726	90733	14,7017548,17286002	0,0,0
chr10	7090913	7090914	chr19	17286830	17286831	TRA	NA	+	-	[Svaba_SR=19,Svaba_PE=29],[Manta_PE=25,Manta_SR=18],[Lumpy_PE=17,Lumpy_SR=16]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=;DisruptR=ANKLE1;ClosestL=AL590095.1;ClosestR=AC010463.1	7591726	90733	14,7090911,17286830	0,0,0
chr10	7592409	7592410	chr18	9868619	9868620	TRA	NA	-	-	[Svaba_SR=25,Svaba_PE=22],[Manta_PE=22,Manta_SR=22],[Lumpy_PE=15,Lumpy_SR=11]	lumpy,manta,svaba	COLO-829_80--COLO-829BL_40	known=;DisruptL=ITIH5;DisruptR=;ClosestL=;ClosestR=RAB31	7591727	9868988	16,7592408,9868619	0,0,0
chr10	53716588	53716589	chr10	53717135	53717136	DEL	NA	+	-	[Svaba_SR=6,Svaba_PE=0],[Lumpy_PE=2,Lumpy_SR=3]	svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;ClosestL=;ClosestR=	33097570	33097570	4,53716585,53717135	0,0,0
chr10	58717661	58717662	chr12	72273293	72273294	TRA	NA	+	+	[Svaba_SR=55,Svaba_PE=7],[Manta_PE=23,Manta_SR=54],[Lumpy_PE=14,Lumpy_SR=42]	lumpy,manta,svaba	COLO-829_80--COLO-829BL_40	known=;DisruptL=BICC1;DisruptR=TRHDE-AS1,TRHDE;Fusion=BICC1-TRHDE-AS1;ClosestL=FAM133CP;ClosestR=	33097570	133264924	44,58717663,72273295	0,0,0
chr10	81882049	81882050	chr10	82067909	82067910	DEL	NA	+	-	[Svaba_SR=17,Svaba_PE=11],[Manta_PE=7,Manta_SR=13],[Lumpy_PE=3,Lumpy_SR=10]	lumpy,svaba,manta	COLO-829_80--COLO-829BL_40	known=;DisruptL=NRG3;DisruptR=NRG3;ClosestL=;ClosestR=	33097570	33097570	15,81882050,82067903	0,0,0
chr10	87940541	87940542	chr10	87952583	87952584	DEL	NA	+	-	[Svaba_SR=34,Svaba_PE=35],[Manta_PE=30,Manta_SR=30],[Lumpy_PE=22,Lumpy_SR=18]	lumpy,manta,svaba	COLO-829_80--COLO-829BL_40	known=;COSMIC;Cancer_census=PTEN|Tier1;DisruptL=PTEN;DisruptR=PTEN;ClosestL=RPL11P3;ClosestR=RPL11P3	133787316	133787316	0,0,0	0,0,0
chr11	37438372	37438373	chr11	40838308	40838309	INV	NA	-	-	[Manta_PE=1,Manta_SR=5]	manta	COLO-829_80--COLO-829BL_40	known=;DisruptL=;DisruptR=LRRC4C;ClosestL=;ClosestR=	128355	81074540	5,37438375,40838306	0,0,0
chr11	80635260	80635261	chr11	81380200	81380201	DEL	NA	+	-	[Lumpy_PE=2,Lumpy_SR=2]	lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=;DisruptR=;ClosestL=ARL6IP1P3;ClosestR=	81074540	81382721	3,80635259,81380200	0,0,0
chr11	81074558	81074559	chr11	81382736	81382737	DEL	NA	+	-	[Svaba_SR=46,Svaba_PE=46],[Manta_PE=40,Manta_SR=37],[Lumpy_PE=25,Lumpy_SR=29]	svaba,lumpy,manta	COLO-829_80--COLO-829BL_40	known=;ClosestL=;ClosestR=	81074541	81382722	29,81074556,81382736	0,0,0
chr14	40748746	40748747	chr14	40774902	40774903	DUP	NA	-	+	[Svaba_SR=6,Svaba_PE=10],[Manta_PE=8,Manta_SR=6],[Lumpy_PE=8,Lumpy_SR=2]	lumpy,svaba,manta	COLO-829_80--COLO-829BL_40	known=;ClosestL=;ClosestR=	18697903	18697903	5,40748748,40774903	0,0,0
chr15	23440459	23440460	chr20	38645823	38645824	TRA	NA	-	-	[Svaba_SR=23,Svaba_PE=12],[Manta_PE=18,Manta_SR=21],[Lumpy_PE=10,Lumpy_SR=8]	svaba,manta,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=GOLGA6L2;DisruptR=ARHGAP40;Fusion=GOLGA6L2-ARHGAP40;ClosestL=AC100756.2;ClosestR=	23747520	64334067	13,23440459,38645823	0,0,0
chr15	23461731	23461732	chr20	38646023	38646024	TRA	NA	-	+	[Svaba_SR=23,Svaba_PE=11],[Manta_PE=13,Manta_SR=20],[Lumpy_PE=6,Lumpy_SR=14]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=;DisruptR=ARHGAP40;ClosestL=GOLGA6L2;ClosestR=	23747520	64334067	11,23461730,38646024	0,0,0
chr15	23467471	23467472	chr15	23472017	23472018	DEL	NA	+	-	[Svaba_SR=0,Svaba_PE=21],[Manta_PE=19,Manta_SR=0]	svaba,manta	COLO-829_80--COLO-829BL_40	known=;ClosestL=;ClosestR=	23747520	23747520	0,0,0	0,0,0
chr15	23586513	23586514	chr15	23747555	23747556	INV	NA	+	+	[Svaba_SR=35,Svaba_PE=34],[Manta_PE=31,Manta_SR=29],[Lumpy_PE=25,Lumpy_SR=23]	svaba,manta,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=MKRN3;DisruptR=;ClosestL=AC126407.1;ClosestR=	23747520	23747521	29,23586512,23747556	0,0,0
chr15	41329093	41329094	chr15	41336311	41336312	DUP	NA	-	+	[Svaba_SR=45,Svaba_PE=56],[Manta_PE=49,Manta_SR=36],[Lumpy_PE=45,Lumpy_SR=25]	lumpy,manta,svaba	COLO-829_80--COLO-829BL_40	known=;DisruptL=OIP5;DisruptR=NUSAP1;ClosestL=NUSAP1;ClosestR=OIP5	23747521	23747521	34,41329096,41336312	0,0,0
chr16	58590640	58590641	chr16	58629426	58629427	DEL	NA	+	-	[Svaba_SR=33,Svaba_PE=55],[Manta_PE=49,Manta_SR=27],[Lumpy_PE=37,Lumpy_SR=20]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=CNOT1;DisruptR=CNOT1;ClosestL=AC010287.1;ClosestR=	58590672	58629426	20,58590642,58629422	0,0,0
chr16	78098254	78098255	chr16	78117165	78117166	DEL	NA	+	-	[Svaba_SR=4,Svaba_PE=3],[Manta_PE=5,Manta_SR=7],[Lumpy_PE=2,Lumpy_SR=5]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=;DisruptR=WWOX;ClosestL=WWOX;ClosestR=AC079414.3	90226217	90226217	7,78098256,78117163	0,0,0
chr16	78894741	78894742	chr16	79061103	79061104	DEL	NA	+	-	[Svaba_SR=30,Svaba_PE=38],[Manta_PE=33,Manta_SR=23],[Lumpy_PE=23,Lumpy_SR=20]	manta,svaba,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=WWOX;DisruptR=WWOX;ClosestL=AC027279.1;ClosestR=AC009145.3	90226217	90226217	18,78894737,79061103	0,0,0
chr18	68712224	68712225	chr18	68715588	68715589	DEL	NA	+	-	[Svaba_SR=20,Svaba_PE=25],[Manta_PE=22,Manta_SR=19],[Lumpy_PE=17,Lumpy_SR=14]	svaba,lumpy,manta	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=TMX3;DisruptR=CCDC102B;ClosestL=CCDC102B;ClosestR=TMX3	80263172	80263172	20,68712224,68715588	0,0,0
chr20	13180082	13180083	chr20	13183452	13183453	DEL	NA	+	-	[Svaba_SR=42,Svaba_PE=67],[Manta_PE=58,Manta_SR=40],[Lumpy_PE=47,Lumpy_SR=30]	svaba,manta,lumpy	COLO-829_80--COLO-829BL_40	known=;COSMIC;ClosestL=SPTLC3;ClosestR=SPTLC3	67260	67260	33,13180081,13183452	0,0,0
chr20	14982311	14982312	chr20	15033301	15033302	DEL	NA	+	-	[Svaba_SR=19,Svaba_PE=26],[Manta_PE=24,Manta_SR=11],[Lumpy_PE=21,Lumpy_SR=7]	svaba,lumpy,manta	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=MACROD2;DisruptR=MACROD2;ClosestL=;ClosestR=RNU6-115P	67260	67260	13,14982310,15033301	0,0,0
chr20	15008178	15008179	chr20	15128171	15128172	DEL	NA	+	-	[Svaba_SR=10,Svaba_PE=16],[Manta_PE=13,Manta_SR=6],[Lumpy_PE=10,Lumpy_SR=4]	svaba,lumpy,manta	COLO-829_80--COLO-829BL_40	known=;DisruptL=MACROD2;DisruptR=MACROD2;ClosestL=RNU6-1159P;ClosestR=	67260	67260	6,15008179,15128171	0,0,0
chr20	15019977	15019978	chr20	15033195	15033196	DEL	NA	+	-	[Svaba_SR=39,Svaba_PE=33],[Manta_PE=24,Manta_SR=31],[Lumpy_PE=13,Lumpy_SR=19]	svaba,lumpy,manta	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=MACROD2;DisruptR=MACROD2;ClosestL=RNU6-1159P;ClosestR=RNU6-115P	67260	67260	29,15019977,15033195	0,0,0
chr21	41446811	41446812	chr21	41448903	41448904	DEL	NA	+	-	[Manta_PE=5,Manta_SR=4],[Lumpy_PE=2,Lumpy_SR=5]	manta,lumpy	COLO-829_80--COLO-829BL_40	known=;DisruptL=MX1;DisruptR=MX1;ClosestL=AP001610.1;ClosestR=AP001610.1	46699872	46699872	4,41446813,41448904	0,0,0
chr22	33363262	33363263	chr22	33442412	33442413	DEL	NA	+	-	[Svaba_SR=26,Svaba_PE=41],[Manta_PE=37,Manta_SR=25],[Lumpy_PE=25,Lumpy_SR=17]	manta,lumpy,svaba	COLO-829_80--COLO-829BL_40	known=;COSMIC;DisruptL=LARGE1;DisruptR=LARGE1;ClosestL=;ClosestR=MIR4764	50808368	50808368	21,33363266,33442407	0,0,0